Our People

We are a highly dynamic and interdisciplinary team with diverse expertise in functional genomics, computational biology, human genetics, and immunology.

Jimmie Ye, Ph.D.

Principal Investigators, Associate Professor in Medicine

Jimmie received his B.S. in Bioengineering and EECS at UC Berkeley and his PhD in Bioinformatics and System Biology at UCSD. He completed his postdoctoral training in Aviv Regev’s lab and the Broad Institute Cell Circuits Program. At UCSF, he is an Associate Professor in the Division of Rheumatology in the Department of Medicine. He is also a member of the Institute for Human Genetics, the Genomic Immunology Institute, and the Bakar Computational Health Sciences Institute and an investigator of the Parker Institute for Cancer Immunotheraphy and Chan Zuckerberg Biohub.

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Postdoctoral Fellows & Trainees

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Shiyun Feng, Ph.D.

Postdoctoral Fellow

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Gracie Gordon

Graduate Student, BMI, NIH F31 Award Recipient

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Tianna Grant

Graduate Student, BMI

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George Hartoularos

Graduate Student, BMI, NSF Graduate Research Fellowship Recipient

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Byungjin Hwang, Ph.D.

Postdoctoral Fellow

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MinCheol Kim

Graduate Student, MSTP, Bioengineering

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Elizabeth McCarthy

Graduate Student, MSTP, Bioinformatics, NIH F30 Award Recipient

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Alexander Merriman

Graduate Student, MSTP, DSCB, NIH F30 Award Recipient

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Cody Mowery

Graduate Student, MSTP, BMS, NIH F30 Award Recipient

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Matthew Schmitz

Graduate Student, DSCB, NIH F31 Award Recipient

Staff

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Matin Bikaran

Staff Research Associate

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Raymund Bueno, Ph.D.

Bioinformatics Scientist

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David Lee

Staff Research Associate

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Anton Ogorodnikov, Ph.D.

Bioinformatics Scientist

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Yang Sun, Ph.D.

Lab Manager

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Alyssa Ward, Ph.D.

Project Manager

Alumni

Pedro Galarza

MS student at NYU Center for Data Science

Rachel Gate

Senior Machine Learning Scientist at Immunai

Andrew Lu

MSTP student at UCLA/CalTech 

Lenka Maliskova

Lab Manager at UCSF Genomics Colab

Sid Raju

PhD student at the Sabeti lab at Harvard University

Meena Subramaniam

Senior Machine Learning Scientist at Immunai

Sasha Targ

MD student at UCSF medical school

Erden Tumurbaatar

Staff member at the Schumer lab at Stanford University 

Interested in working at Ye Lab?

We’re seeking motivated undergraduate students, graduate students, and postdoc fellows with strong backgrounds in genetics, genomics, experimental and computational immunology to join our team. We want to hear from you, reach out to us!